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Tara-oceans samples barcoding and shotgun sequencing

This project will use samples collected during the Tara-Oceans scientific expedition from 2009 to 2012. By March 2012, the Tara schooner, equipped with advanced sampling systems covering a broad range of organism sizes from viruses to animals, gathered standardized genetic (total DNA/RNA), morphological, and physico-chemical (contextual) samples from 153 sites across the world's oceans. These locations were carefully chosen with input from real-time remote sensing and in-situ hydrographic criteria. In total, about 50,000 biological samples and 13,000 contextual measures from three depths will be analyzed. The metagenomics aspect of the project involves analyzing size-fractionated plankton samples through barcoding and shotgun sequencing. Additionally, isolated single-cell amplified protists and single-organisms isolated metazoans will be sequenced as reference genomes.

Category: Molecular Biology

Citation: Guidi, Lionel, et al. “Plankton Networks Driving Carbon Export in the Oligotrophic Ocean.” Nature, vol. 532, no. 7600, 10 Feb. 2016, pp. 465–470, https://doi.org/10.1038/nature16942. Accessed 27 May 2020. [Accessed 10 Dec. 2023].